A writing log kept beside a paper so that notes on decisions and plans are not lost at submission. The log opens with project initiation: rationale, audience and potential target journals, and carries on through the stages of the work. It includes a word count record, annotated bibliography file, pgfplots charts, long tables, minted code listings and an index, and helps answer later questions from reviewers.
Shared under the MIT License. All credit to MooersLab; the licence comes with the project's files.